817008247ce2c6829e8e8584e579f88d *ChangeLog
3ce15e935e9c6beb78ccc5d5c1666534 *DESCRIPTION
00f346fcf1049643f551123ad5bbc1d9 *NAMESPACE
c3e8bb90abd277f56413e4c508a6833c *R/boot.R
8b7f8323654de2c622caf77cc6e68151 *R/constants.R
0bfe7241f81077ce90cd168954c1c70b *R/draic.R
af2cf125ad1884add117c1cf26638372 *R/hmm-dists.R
22dd94945663322a20767b04aefd25ac *R/hmm.R
3f69bc59cd0afe0a6451089743fa37fc *R/msm.R
7c4fa51638caa9fd7819e73e206b60f2 *R/mstate.R
a0d0b4080044ca84d7555a56c6a3bd2e *R/olddata.R
d5d518b6843e6ed42eb796dd9fbdc18a *R/optim.R
6cad204466919480cd65484de1909f68 *R/outputs.R
e17113eac817aea9125dcd1ebc1431dd *R/pearson.R
498644af356ecd8e9a5482c48cee1392 *R/phase.R
335792c9350d36b1039607f4c8a20e39 *R/simul.R
9145455212eca4557e84b7446ec80102 *R/utils.R
9466617ec9497acb005673cd102bb1a8 *TODO
a6af734eaa714952b0cc027277eda95f *build/vignette.rds
2e83efb31c764734aa67ed4e686c7fc1 *data/bos3.rda
21080bd2b47eb8885142701c92c14c73 *data/bos4.rda
35ea8ffa25baf02ee38f4ccb5fdc0446 *data/msmdata.rda
f8474ef9e0f949bccbb4e244a4ac472c *inst/CITATION
a56aeec263e072ca1049d87d3cd17df3 *inst/NEWS
3aba5db57386aaa1cce65437701db389 *inst/NEWS.mine
e6d4403e3db2c7d7e6b2c7c5509357e6 *inst/NEWS.r57
1c46f704683f773df029342888e00a9f *inst/NEWS.r64
63358a79e444416cd82d931cb3b32aad *inst/doc/msm-manual.R
d0ec3a1831ca9681d8f8b9f678e2c21e *inst/doc/msm-manual.pdf
5532de7924656013378440947427a286 *man/2phase.Rd
c8ebb7cd8ee19dfe81bdbd947ef69463 *man/MatrixExp.Rd
c39fbb4debea235b9582d01b68522d6e *man/aneur.Rd
54fddc17c3786a5787295a0a23c1bc4c *man/boot.msm.Rd
bf137a1a550f7ac0ca4bf0fa914ef282 *man/bos.Rd
684bf479f28350bc315456e67078c8b6 *man/cav.Rd
cb79a30165424c4185f77aa048ba84c9 *man/cmodel.object.Rd
8cecf9f6ad73f40d0ebd63f5db8987e4 *man/coef.msm.Rd
575e59560acdc438de7cd9bf68859180 *man/crudeinits.msm.Rd
8af5f22e6e8ef3239098d8a1fb58e0c3 *man/deltamethod.Rd
54d3cd3d4b0c3e1bfcbfb7665f5e66f0 *man/draic.msm.Rd
d92890b198df7df2524be56892e98d4e *man/ecmodel.object.Rd
39ba8581aa3759d26b46c8fef59c5247 *man/efpt.msm.Rd
d108481820830a65ae93ed540ba7d2c0 *man/ematrix.msm.Rd
9944f8cbf7fc7b23859f11bf96a3142c *man/emodel.object.Rd
ad01dc753187f7e9836e5461df1cd7a0 *man/fev.Rd
c7d808d38d3fd0724aa70a4a2d9820ea *man/hazard.msm.Rd
80added92f36aa32da2d7fbb682ac9a2 *man/hmm-dists.Rd
73adcc4a8d4ed9fb7e647077169720ee *man/hmodel.object.Rd
c1709e080e8251957047bb0b3c4ead8e *man/logLik.msm.Rd
7674dab997e73c744d34637a20500a62 *man/lrtest.msm.Rd
35b371252349975ce086ce85277ebbe8 *man/medists.Rd
8eafefa8f9c9d37041f0dfcb8a9a726d *man/model.frame.msm.Rd
eafe846b6ede31a8bf787a11734f85cb *man/msm.Rd
883ea5ae45736e561d3887cec651d4e5 *man/msm.form.qoutput.Rd
e5ac01b9806653ecc1ffd733ea330916 *man/msm.object.Rd
97f89034e054247b7458d3241b859441 *man/msm2Surv.Rd
d9f40e76e98dad52c17d3cc6f7bf2589 *man/odds.msm.Rd
b5f0d003ab82d673c7b8423e03bdcdbf *man/paramdata.object.Rd
7a1f51af91ae24a4a2eb82ce014920ca *man/pearson.msm.Rd
61c7a557593508adf8531e8f2436106d *man/pexp.Rd
e28d9f3150505961071275fd7122feaf *man/phasemeans.msm.Rd
5dbea8e868f943e06e97699438da0c9a *man/plot.msm.Rd
6379a03198d665ca39b64291e0687547 *man/plot.prevalence.msm.Rd
f1ec92467ce98470294d0d894f871379 *man/plot.survfit.msm.Rd
9002c80c8c56fe6e4eb7be04f9cdd2d5 *man/plotprog.msm.Rd
265c8748e30a39cc9bd6d5959b60a4a3 *man/pmatrix.msm.Rd
023a20a802ef324b83ef5fbc9f1ee115 *man/pmatrix.piecewise.msm.Rd
711bec59674e13629e212c2eb809fd7f *man/pnext.msm.Rd
643594155a70189c5b1073cebd7a3318 *man/ppass.msm.Rd
a052d370e5434c7a9b8a5450e925b28c *man/prevalence.msm.Rd
3ef2bcca419edc4ad8a66f9a6fdf79df *man/print.msm.Rd
dec4bb785a5bec882c1de325799becb0 *man/printold.msm.Rd
198a9717e5c86131c445c6a0f9edbe6a *man/psor.Rd
c4b581aeca5b8dc0dab5e0429524ea9f *man/qcmodel.object.Rd
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5e54bfe5cd967b06ae414f5da052630f *man/qmatrix.msm.Rd
06f71db82799f70165c6934f36128e52 *man/qmodel.object.Rd
0c6a14f2048e4fe657f4783dd2cd8c25 *man/qratio.msm.Rd
2eb16a4f436fc56840b9d2c0d22b5f73 *man/recreate.olddata.Rd
5ec6b1d19e5c57ba5df03ba24a01af24 *man/scoreresid.msm.Rd
0f946baaeb361ae656073caa1f51ad6d *man/sim.msm.Rd
9573f3ac73dfb088d42cfa1d7957d50d *man/simfitted.msm.Rd
19d5752e21d5c62f7668ebebf4d44fd2 *man/simmulti.msm.Rd
041f32d17c6ed60189d9831f6686303a *man/sojourn.msm.Rd
f9578a0bc47c44fbaf45d5213fde69ce *man/statetable.msm.Rd
237d677ff187a3b23455bda36ed6ae71 *man/summary.msm.Rd
8976bd0da49fd54ae102544b0154a968 *man/surface.msm.Rd
5441acdc455c634adb94bfcd5023f399 *man/tnorm.Rd
a510b0f155e7055f52d4de63cdc1a836 *man/totlos.msm.Rd
ba71e20c9fa56b3e1f4c571c613c65eb *man/transient.msm.Rd
b8c573b797c66312ba46fa37c01e88c6 *man/viterbi.msm.Rd
619d13ce6900fca2139e2139408d39ad *src/Makevars
2020d37aefd54da007f8eedc9c958fe0 *src/analyticp.c
b2954670e5c7bfca19cb6bb42e3f5e32 *src/doc/Makefile
8206c9091e718652d132378ade48f125 *src/doc/Sweave-local.sty
3f41f9a36481dd33390cfaf81ee2ca5c *src/doc/figures/fev_viterbi.pdf
e3889cf40ff59689f1a6cfac011c7115 *src/doc/figures/general.pdf
06f4bff6b071901d1120c7431193c59d *src/doc/figures/hidden.pdf
af3adf546c0c77610b76919d15607a18 *src/doc/figures/illdeath.pdf
2d8ca6ab876fe50cf7bfee4724fdcbc3 *src/doc/figures/multistate.pdf
8ec73693aa663c3a367f7bd5ea663c7c *src/doc/figures/p2q1.pdf
7f89c5f85f787b2b41c623cbf366d042 *src/doc/figures/p2q12.pdf
04f638273c713543f6dad7c71778df07 *src/doc/figures/p3q12.pdf
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0ae4b74fa9984b26cdaf3a37ef0ec733 *src/doc/figures/p3q135.pdf
5178056951a81e36e697d91d6f655348 *src/doc/figures/p3q14.pdf
1d88c1377297306389a460a8a5598ff2 *src/doc/figures/p3q16.pdf
a54418b47ce58e6fa28c500af30d5566 *src/doc/figures/p4q13569.pdf
0bbc74d48ecbcee9199ebea6811bf377 *src/doc/figures/p4q159.pdf
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2ea085b4ec235c4882c6a0958c9362a5 *src/doc/figures/sampling.pdf
0d1946d67e7b9841df383e78e9ac234f *src/doc/msm-manual.Rnw
be6c66fe663712eea54faf33c2861c3b *src/doc/msm.bib
a75b5dc8161768aa323eb071bcbaee57 *src/hmm.c
903ef8e1e825aed5d5d61741137f46c8 *src/hmm.h
894693969e7fe5e8bd591dca80cfacb8 *src/hmmderiv.c
20b9f36cfd31538bfcacf1802c42c44d *src/lik.c
ef04ad9ed87ac6792697e34178539ec9 *src/msm.h
66a156988bdb22342c372d4de803dc54 *src/pijt.c
7a2c53c3ce4c4dd37a62ef4dfcc35ce3 *tests/test_base.R
2922239c3c75d5dd2969f95740ed4595 *tests/testthat/helper.r
2c29e599c4974ef47222a7f154b47a54 *tests/testthat/test_analyticp.r
64a3fabf777eb2b737a86e69e754303e *tests/testthat/test_datasumm.r
3853a80210c452288ad24e9a67846f5e *tests/testthat/test_deriv.r
3852734ea3cd6b8e37b5dfadc0811eb4 *tests/testthat/test_models.r
428617fee7322015c155e50ca013cde7 *tests/testthat/test_models_hmm.r
32a9c2170bf42b7bb64d32c699fc0b22 *tests/testthat/test_models_misc.r
e9e48c58a5cffdde6650621cd87a8591 *tests/testthat/test_utils.r
